Uses of Interface
org.biojava.bio.dp.TrainingAlgorithm

Packages that use TrainingAlgorithm

org.biojava.bio.dp

HMM and Dynamic Programming Algorithms.

Uses of TrainingAlgorithm in org.biojava.bio.dp

Classes in org.biojava.bio.dp that implement TrainingAlgorithm

class	AbstractTrainer An abstract implementation of TrainingAlgorithm that provides a framework for plugging in per-cycle code for parameter optimization.
class	BaumWelchSampler Train a hidden markov model using a sampling algorithm.
class	BaumWelchTrainer Train a hidden markov model using maximum likelihood.

Methods in org.biojava.bio.dp with parameters of type TrainingAlgorithm

boolean

StoppingCriteria.isTrainingComplete(TrainingAlgorithm ta) Decide if the training has completed.