Uses of Package
org.biojava.bio.program.gff

Packages that use org.biojava.bio.program.gff

org.biojava.bio.program.gff	GFF manipulation.
org.biojava.bio.program.gff3	Support for reading and writing GFF3.
org.biojava.bio.seq.distributed	Sequences and SequenceDBs which are composed from data taken from a number of data sources.

Classes in org.biojava.bio.program.gff used by org.biojava.bio.program.gff

GFFDocumentHandler
The interface for things that listen to GFF event streams.

GFFEntrySet
A set of entries and comments as a representation of a GFF file.

GFFErrorHandler
Interface which captures any errors which occur when parsing a GFF stream.

GFFRecord
A single GFF record.

GFFRecordFilter
A filter that will accept or reject a GFFEntry.

IgnoreRecordException
Ignore this record in the stream.

SimpleGFFRecord
A no-frills implementation of a GFFRecord.

Classes in org.biojava.bio.program.gff used by org.biojava.bio.program.gff3

GFFErrorHandler
Interface which captures any errors which occur when parsing a GFF stream.

IgnoreRecordException
Ignore this record in the stream.

Classes in org.biojava.bio.program.gff used by org.biojava.bio.seq.distributed

GFFEntrySet
A set of entries and comments as a representation of a GFF file.