Uses of Interface
org.biojava.bio.program.ssaha.SequenceStreamer

Packages that use SequenceStreamer

org.biojava.bio.program.ssaha

SSAHA sequence searching API.

Uses of SequenceStreamer in org.biojava.bio.program.ssaha

Classes in org.biojava.bio.program.ssaha that implement SequenceStreamer

static class	SequenceStreamer.FileStreamer
static class	SequenceStreamer.SequenceDBStreamer

Methods in org.biojava.bio.program.ssaha with parameters of type SequenceStreamer

DataStore

CompactedDataStoreFactory.buildDataStore(File storeFile, SequenceStreamer streamer, Packing packing, int wordLength, int stepSize, int threshold)