Uses of Class
org.biojava.bio.seq.FramedFeature.ReadingFrame

Packages that use FramedFeature.ReadingFrame

org.biojava.bio.seq	Classes and interfaces for defining biological sequences and informatics objects.
org.biojava.bio.seq.impl	Standard in-memory implementations of Sequence and Feature.

Uses of FramedFeature.ReadingFrame in org.biojava.bio.seq

Fields in org.biojava.bio.seq declared as FramedFeature.ReadingFrame

static FramedFeature.ReadingFrame	FramedFeature.FRAME_0
static FramedFeature.ReadingFrame	FramedFeature.FRAME_1
static FramedFeature.ReadingFrame	FramedFeature.FRAME_2
FramedFeature.ReadingFrame	FramedFeature.Template.readingFrame

Methods in org.biojava.bio.seq that return FramedFeature.ReadingFrame

FramedFeature.ReadingFrame	FeatureFilter.FrameFilter.getFrame() Retrieve the reading frame this filter matches.
FramedFeature.ReadingFrame	FramedFeature.getReadingFrame() return the reading frame of the feature.

Methods in org.biojava.bio.seq with parameters of type FramedFeature.ReadingFrame

static FeatureFilter

FilterUtils.byFrame(FramedFeature.ReadingFrame frame) Construct a filter which matches FramedFeatures with the specified reading frame.

Constructors in org.biojava.bio.seq with parameters of type FramedFeature.ReadingFrame

FeatureFilter.FrameFilter(FramedFeature.ReadingFrame frame)
Build a new filter that matches all features of a reading frame.

Uses of FramedFeature.ReadingFrame in org.biojava.bio.seq.impl

Methods in org.biojava.bio.seq.impl that return FramedFeature.ReadingFrame

FramedFeature.ReadingFrame

SimpleFramedFeature.getReadingFrame()