Uses of Interface
org.biojava.bio.seq.GappedSequence

Packages that use GappedSequence

org.biojava.bio.seq	Classes and interfaces for defining biological sequences and informatics objects.
org.biojava.bio.seq.impl	Standard in-memory implementations of Sequence and Feature.

Uses of GappedSequence in org.biojava.bio.seq

Methods in org.biojava.bio.seq that return GappedSequence

static GappedSequence	DNATools.createGappedDNASequence(String dna, String name) Get a new dna as a GappedSequence
static GappedSequence	ProteinTools.createGappedProteinSequence(String theProtein, String name) Get a new protein as a GappedSequence
static GappedSequence	SequenceTools.gappedView(Sequence seq) Create a new gapped sequence for a sequence.

Uses of GappedSequence in org.biojava.bio.seq.impl

Classes in org.biojava.bio.seq.impl that implement GappedSequence

class

SimpleGappedSequence Simple implementation of GappedSequence.