Uses of Interface
org.biojava.bio.seq.homol.SimilarityPairFeature

Packages that use SimilarityPairFeature

org.biojava.bio.seq.homol	The classes and interfaces for defining sequence similarity and honology.
org.biojava.bio.seq.impl	Standard in-memory implementations of Sequence and Feature.

Uses of SimilarityPairFeature in org.biojava.bio.seq.homol

Fields in org.biojava.bio.seq.homol declared as SimilarityPairFeature

SimilarityPairFeature

SimilarityPairFeature.Template.sibling sibling SimilarityPairFeature field.

Methods in org.biojava.bio.seq.homol that return SimilarityPairFeature

SimilarityPairFeature

SimilarityPairFeature.getSibling() getSibling returns the sibling Feature, query for subject and vice versa.

Methods in org.biojava.bio.seq.homol with parameters of type SimilarityPairFeature

void	SimilarityPairFeature.setSibling(SimilarityPairFeature sibling) setSibling sets the sibling feature of the pair.

Uses of SimilarityPairFeature in org.biojava.bio.seq.impl

Classes in org.biojava.bio.seq.impl that implement SimilarityPairFeature

class

SimpleSimilarityPairFeature SimpleSimilarityPairFeature represents a similarity between a query sequence and a subject sequence as produced by a search program.

Methods in org.biojava.bio.seq.impl that return SimilarityPairFeature

SimilarityPairFeature

SimpleSimilarityPairFeature.getSibling() getSibling returns the sibling feature of the pair.

Methods in org.biojava.bio.seq.impl with parameters of type SimilarityPairFeature

void	SimpleSimilarityPairFeature.setSibling(SimilarityPairFeature sibling)