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Package org.biojava.bio.structure.align.pairwise

Interface Summary
Alignable  
 

Class Summary
AligNPE  
AltAligComparator  
AlternativeAlignment Implements a class which handles one possible (alternative) solution.
FragmentJoiner Joins the initial Fragments together to larger Fragments
FragmentPair a pair of fragments of two protein structures
Gotoh a class to perform Gotoh algorithm
StrCompAlignment  
 

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