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| Packages that use BioEntryDBLite | |
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| org.biojavax.bio.db | Interactions between biojavax objects and a DB. |
| org.biojavax.bio.db.biosql | |
| org.biojavax.bio.db.ncbi | |
| Uses of BioEntryDBLite in org.biojavax.bio.db |
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| Subinterfaces of BioEntryDBLite in org.biojavax.bio.db | |
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interface |
BioEntryDB
. |
interface |
RichSequenceDB
A database of RichSequences with accessible keys and iterators over all sequences. |
interface |
RichSequenceDBLite
A database of RichSequences. |
| Classes in org.biojavax.bio.db that implement BioEntryDBLite | |
|---|---|
class |
AbstractBioEntryDB
An abstract implementation of BioEntryDB that provides the getBioEntryIterator method. |
class |
AbstractRichSequenceDB
An abstract implementation of RichSequenceDB that provides the getRichSequenceIterator method. |
class |
HashBioEntryDB
An implementation of RichSequenceDB that uses an underlying HashMap to store the RichSequence objects. |
class |
HashRichSequenceDB
An implementation of RichSequenceDB that uses an underlying HashMap to store the RichSequence objects. |
| Uses of BioEntryDBLite in org.biojavax.bio.db.biosql |
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| Classes in org.biojavax.bio.db.biosql that implement BioEntryDBLite | |
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class |
BioSQLBioEntryDB
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class |
BioSQLRichSequenceDB
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| Uses of BioEntryDBLite in org.biojavax.bio.db.ncbi |
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| Classes in org.biojavax.bio.db.ncbi that implement BioEntryDBLite | |
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class |
GenbankRichSequenceDB
This class contains functions accessing DNA sequences in Genbank format. |
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