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| Packages that use RankedCrossRef | |
|---|---|
| org.biojavax | The Biojava extensions packages, classes that extend the core biojava functionality |
| org.biojavax.bio | Classes to represent biological entities and their relationships. |
| org.biojavax.bio.seq | Rich implementations of Sequences, Locations and Features. |
| org.biojavax.bio.seq.io | Classes to support the I/O of RichSequence and Bioentry objects. |
| org.biojavax.ontology | Extensions to the biojava ontology model that represent BioSQL ontology. |
| Uses of RankedCrossRef in org.biojavax |
|---|
| Classes in org.biojavax that implement RankedCrossRef | |
|---|---|
class |
SimpleRankedCrossRef
Simple implementation of RankedCrossRef. |
| Methods in org.biojavax with parameters of type RankedCrossRef | |
|---|---|
void |
RankedCrossRefable.addRankedCrossRef(RankedCrossRef crossref)
Adds a ranked cross reference to the existing set. |
void |
RankedCrossRefable.removeRankedCrossRef(RankedCrossRef crossref)
Removes a ranked cross reference from the existing set. |
| Uses of RankedCrossRef in org.biojavax.bio |
|---|
| Methods in org.biojavax.bio with parameters of type RankedCrossRef | |
|---|---|
void |
SimpleBioEntry.addRankedCrossRef(RankedCrossRef crossref)
Adds a ranked cross reference to the existing set. |
void |
SimpleBioEntry.removeRankedCrossRef(RankedCrossRef crossref)
Removes a ranked cross reference from the existing set. |
| Uses of RankedCrossRef in org.biojavax.bio.seq |
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| Methods in org.biojavax.bio.seq with parameters of type RankedCrossRef | |
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void |
SimpleRichFeature.addRankedCrossRef(RankedCrossRef crossref)
Adds a ranked cross reference to the existing set. |
void |
SimpleRichFeature.removeRankedCrossRef(RankedCrossRef crossref)
Removes a ranked cross reference from the existing set. |
| Uses of RankedCrossRef in org.biojavax.bio.seq.io |
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| Methods in org.biojavax.bio.seq.io with parameters of type RankedCrossRef | |
|---|---|
void |
SimpleRichSequenceBuilder.setRankedCrossRef(RankedCrossRef ref)
Call back method so the event emitter can tell the listener about a cross reference. |
void |
DebuggingRichSeqIOListener.setRankedCrossRef(RankedCrossRef crossRef)
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void |
RichSeqIOAdapter.setRankedCrossRef(RankedCrossRef crossRef)
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void |
RichSeqIOListener.setRankedCrossRef(RankedCrossRef crossRef)
Call back method so the event emitter can tell the listener about a cross reference. |
| Uses of RankedCrossRef in org.biojavax.ontology |
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| Methods in org.biojavax.ontology with parameters of type RankedCrossRef | |
|---|---|
void |
SimpleComparableTerm.addRankedCrossRef(RankedCrossRef crossref)
Adds a ranked cross reference to the existing set. |
void |
SimpleComparableTerm.removeRankedCrossRef(RankedCrossRef crossref)
Removes a ranked cross reference from the existing set. |
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