Uses of Interface
org.biojavax.RankedCrossRefable

Packages that use RankedCrossRefable

org.biojavax.bio	Classes to represent biological entities and their relationships.
org.biojavax.bio.seq	Rich implementations of Sequences, Locations and Features.
org.biojavax.ontology	Extensions to the biojava ontology model that represent BioSQL ontology.

Uses of RankedCrossRefable in org.biojavax.bio

Subinterfaces of RankedCrossRefable in org.biojavax.bio

interface

BioEntry This class relates to the bioentry table in BioSQL.

Classes in org.biojavax.bio that implement RankedCrossRefable

class

SimpleBioEntry Reference implementation of a BioEntry object which has no features or sequence.

Uses of RankedCrossRefable in org.biojavax.bio.seq

Subinterfaces of RankedCrossRefable in org.biojavax.bio.seq

interface	RichFeature Represents a feature that can be given name and rank and be moved from one sequence to another.
interface	RichSequence A rich sequence is a combination of a org.biojavax.bio.Bioentry and a Sequence.

Classes in org.biojavax.bio.seq that implement RankedCrossRefable

class	SimpleRichFeature A simple implementation of RichFeature.
class	SimpleRichSequence A simple implementation of RichSequence.
class	ThinRichSequence A simple implementation of RichSequence.

Uses of RankedCrossRefable in org.biojavax.ontology

Subinterfaces of RankedCrossRefable in org.biojavax.ontology

interface

ComparableTerm Makes Term objects comparable properly and adds some extra features to them.

Classes in org.biojavax.ontology that implement RankedCrossRefable

class

SimpleComparableTerm A Term object that can be compared and thus sorted.