
                            EMBOSS: cutgextract
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                              Program cutgextract
                                       
Function

   Extract data from CUTG
   
Description

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Usage

   Here is a sample session with cutgextract:

% cutgextract

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Command line arguments

   Mandatory qualifiers:
  [-directory]         dirlist    CUTG directory

   Optional qualifiers: (none)
   Advanced qualifiers:
   -wildspec           string     Type of codon file

   General qualifiers:
  -help                bool       report command line options. More
                                  information on associated and general
                                  qualifiers can be found with -help -verbose
   

   EMBOSS An error in ajacd.c at line 10825: unknown attribute 'name' for
   'directory'
   
Input file format

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Output file format

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Data files

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Notes

   None.
   
References

   None.
   
Warnings

   None.
   
Diagnostic Error Messages

   None.
   
Exit status

   It always exits with status 0.
   
Known bugs

   None.
   
See also

   Program name Description
   domainer Build domain coordinate files
   nrscope Converts redundant EMBL-format SCOP file to non-redundant one
   pdbtosp Convert raw swissprot:pdb equivalence file to embl-like format
   printsextract Extract data from PRINTS
   prosextract Builds the PROSITE motif database for patmatmotifs to
   search
   rebaseextract Extract data from REBASE
   scope Convert raw scop classification file to embl-like format
   scopparse Reads raw-, and writes EMBL-like, scop classification files
   seqnr Converts redundant database results to a non-redundant set of
   hits
   tfextract Extract data from TRANSFAC
   
Author(s)

   This application was written by Alan Bleasby (ableasby@hgmp.mrc.ac.uk)
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History

   Written (date) - author. **************** EDIT HERE ****************
   
Target users

   This program is intended to be used by everyone and everything, from
   naive users to embedded scripts.
   
Comments
