Member List

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# gnDataBaseSource Member List

This is the complete list of members for gnDataBaseSource, including all inherited members.

Clone() const=0 | gnDataBaseSource | `[pure virtual]`
Clone() const=0 | gnDataBaseSource | `[pure virtual]`
Close()=0 | gnDataBaseSource | `[pure virtual]`
GetContigID(const string &name) const=0 | gnDataBaseSource | `[pure virtual]`
GetContigListLength() const=0 | gnDataBaseSource | `[pure virtual]`
GetContigName(const uint32 i) const=0 | gnDataBaseSource | `[pure virtual]`
GetContigSeqLength(const uint32 i) const=0 | gnDataBaseSource | `[pure virtual]`
GetFilter() const=0 | gnDataBaseSource | `[pure virtual]`
GetOpenString() const=0 | gnDataBaseSource | `[pure virtual]`
GetSpec() const=0 | gnDataBaseSource | `[pure virtual]`
gnBaseSource() | gnBaseSource | `[inline]`
gnClone() | gnClone | `[inline]`
gnDataBaseSource() | gnDataBaseSource | `[inline, private]`
HasContig(const string &name) const=0 | gnDataBaseSource | `[pure virtual]`
Open(string openString)=0 | gnDataBaseSource | `[pure virtual]`
Open()=0 | gnDataBaseSource | `[pure virtual]`
Read(const uint64 pos, char *buf, uint32 &bufLen)=0 | gnDataBaseSource | `[pure virtual]`
SeqRead(const gnSeqI start, char *buf, uint32 &bufLen, const uint32 contigI=ALL_CONTIGS)=0 | gnDataBaseSource | `[pure virtual]`
SetFilter(gnFilter *filter)=0 | gnDataBaseSource | `[pure virtual]`
~gnBaseSource() | gnBaseSource | `[inline, virtual]`
~gnClone() | gnClone | `[inline, virtual]`
~gnDataBaseSourcee() | gnDataBaseSource | `[inline, virtual]`