| Program name | Description |
| cutgextract |
Extract data from CUTG
|
| domainer |
Build domain coordinate files
|
| nrscope |
Converts redundant EMBL-format SCOP file to non-redundant one
|
| pdbtosp |
Convert raw swissprot:pdb equivalence file to embl-like format
|
| printsextract |
Extract data from PRINTS
|
| prosextract |
Builds the PROSITE motif database for patmatmotifs to search
|
| rebaseextract |
Extract data from REBASE
|
| scope |
Convert raw scop classification file to embl-like format
|
| scopparse |
Reads raw scop classifications file and writes embl-like format scop classification file
|
| seqnr |
Converts redundant database results to a non-redundant set of hits
|
| tfextract |
Extract data from TRANSFAC
|