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gnStringTools.h File Reference

#include <iostream>
#include <string>
#include <vector>
#include <stdlib.h>
#include <stdio.h>
#include "gn/gnDefs.h"

Go to the source code of this file.

Functions
unsigned int	removeSpace (string &str)
void	removeEndSpace (string &str)
bool	isNewLine (char ch)
bool	isWhiteSpace (char ch)
bool	isSpace (char ch)
string	uintToString (unsigned int value)
string	ulongToString (unsigned long value)
string	charArrayToString (char *charArray, unsigned int length)
bool	isBase (char base)
void	BaseCount (const string &bases, gnSeqI &a_count, gnSeqI &c_count, gnSeqI &g_count, gnSeqI &t_count, gnSeqI &other_count)
unsigned int	parseValue (string &valueString)
int	parseUintValue (string &valueString)
int	parseIntValue (string &valueString)
vector< string >	tokenizeString (const string &str, char delimiter='\t')
vector< string >	tokenizeString (const char *str, unsigned int len, char delimiter='\t')
void	standarizePathString (string &oFileName)
string	getPathString (string oFileName)
string	getFileString (string oFileName)
string	getExtString (string oFileName)
string	getFileNoExtString (string oFileName)

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Function Documentation

void BaseCount ( const string & bases, gnSeqI & a_count, gnSeqI & c_count, gnSeqI & g_count, gnSeqI & t_count, gnSeqI & other_count )

Definition at line 15 of file gnStringTools.cpp. Referenced by gnGBKSource::Write().

string charArrayToString ( char * charArray, unsigned int length )

string getExtString ( string oFileName )

Definition at line 264 of file gnStringTools.cpp.

string getFileNoExtString ( string oFileName )

Definition at line 274 of file gnStringTools.cpp.

string getFileString ( string oFileName )

Definition at line 257 of file gnStringTools.cpp. Referenced by gnSourceFactory::AddSource(), and gnSourceFactory::HasSource().

string getPathString ( string oFileName )

Definition at line 248 of file gnStringTools.cpp. Referenced by gnDNXSource::ParseStream().

bool isBase ( char base )

bool isNewLine ( char ch )

Definition at line 91 of file gnStringTools.cpp. Referenced by gnFASSource::ParseStream(), and isSpace().

bool isSpace ( char ch )

Definition at line 109 of file gnStringTools.cpp. Referenced by gnFASSource::ParseStream(), and removeEndSpace().

bool isWhiteSpace ( char ch )

Definition at line 100 of file gnStringTools.cpp. Referenced by isSpace().

int parseIntValue ( string & valueString )

Definition at line 178 of file gnStringTools.cpp.

int parseUintValue ( string & valueString )

Definition at line 162 of file gnStringTools.cpp.

unsigned int parseValue ( string & valueString )

Definition at line 151 of file gnStringTools.cpp.

void removeEndSpace ( string & str )

Definition at line 74 of file gnStringTools.cpp.

unsigned int removeSpace ( string & str )

Definition at line 36 of file gnStringTools.cpp.

void standarizePathString ( string & oFileName )

Definition at line 239 of file gnStringTools.cpp. Referenced by gnSourceFactory::HasPath(), gnSourceFactory::HasSource(), and gnSourceFactory::PathExists().

vector< string > tokenizeString ( const char * str, unsigned int len, char delimiter = '\t' )

Definition at line 215 of file gnStringTools.cpp. Referenced by tokenizeString().

vector< string > tokenizeString ( const string & str, char delimiter = '\t' )

string uintToString ( unsigned int value )

Definition at line 118 of file gnStringTools.cpp. Referenced by gnGBKSource::Write(), and gnFASSource::Write().

string ulongToString ( unsigned long value )

Definition at line 134 of file gnStringTools.cpp.

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