ID   XLRHODOP   standard; RNA; VRT; 1684 BP.
XX
AC   L07770;
XX
SV   L07770.1
XX
DT   12-DEC-1992 (Rel. 34, Created)
DT   04-MAR-2000 (Rel. 63, Last updated, Version 7)
XX
DE   Xenopus laevis rhodopsin mRNA, complete cds.
XX
KW   G protein-coupled receptor; phototransduction protein; retinal protein;
KW   rhodopsin; transmembrane protein.
XX
OS   Xenopus laevis (African clawed frog)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC   Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus.
XX
RN   [1]
RP   1-1684
RA   Knox B.E., Scalzetti L.C., Batni S., Wang J.Q.;
RT   "Molecular cloning of the abundant rhodopsin and transducin from Xenopus
RT   laevis";
RL   Unpublished.
XX
RN   [2]
RP   1-1684
RX   MEDLINE; 96216396.
RA   Batni S., Scalzetti L., Moody S.A., Knox B.E.;
RT   "Characterization of the Xenopus rhodopsin gene";
RL   J. Biol. Chem. 271(6):3179-3186(1996).
XX
DR   SWISS-PROT; P29403; OPSD_XENLA.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1684
FT                   /db_xref="taxon:8355"
FT                   /organism="Xenopus laevis"
FT                   /dev_stage="adult"
FT                   /tissue_type="retina"
FT                   /tissue_lib="lambda-ZAPII"
FT   CDS             110..1174
FT                   /codon_start=1
FT                   /db_xref="SWISS-PROT:P29403"
FT                   /note="gene accession number U23808"
FT                   /product="rhodopsin"
FT                   /protein_id="AAC42232.1"
FT                   /translation="MNGTEGPNFYVPMSNKTGVVRSPFDYPQYYLAEPWQYSALAAYMF
FT                   LLILLGLPINFMTLFVTIQHKKLRTPLNYILLNLVFANHFMVLCGFTVTMYTSMHGYFI
FT                   FGQTGCYIEGFFATLGGEVALWSLVVLAVERYMVVCKPMANFRFGENHAIMGVAFTWIM
FT                   ALSCAAPPLFGWSRYIPEGMQCSCGVDYYTLKPEVNNESFVIYMFIVHFTIPLIVIFFC
FT                   YGRLLCTVKEAAAQQQESATTQKAEKEVTRMVVIMVVFFLICWVPYAYVAFYIFTHQGS
FT                   NFGPVFMTVPAFFAKSSAIYNPVIYIVLNKQFRNCLITTLCCGKNPFGDEDGSSAATSK
FT                   TEASSVSSSQVSPA"
FT   misc_feature    189..1684
FT                   /note="sequenced from clone pXOP71"
FT   variation       1224
FT                   /note="clone pX0P5 contained deletion from bp 1224-1534"
XX
SQ   Sequence 1684 BP; 426 A; 431 C; 339 G; 488 T; 0 other;
     ggtagaacag cttcagttgg gatcacaggc ttctagggat cctttgggca aaaaagaaac        60
     acagaaggca ttctttctat acaagaaagg actttataga gctgctacca tgaacggaac       120
     agaaggtcca aatttttatg tccccatgtc caacaaaact ggggtggtac gaagcccatt       180
     cgattaccct cagtattact tagcagagcc atggcaatat tcagcactgg ctgcttacat       240
     gttcctgctc atcctgcttg ggttaccaat caacttcatg accttgtttg ttaccatcca       300
     gcacaagaaa ctcagaacac ccctaaacta catcctgctg aacctggtat ttgccaatca       360
     cttcatggtc ctgtgtgggt tcacggtgac aatgtacacc tcaatgcacg gctacttcat       420
     ctttggccaa actggttgct acattgaagg cttctttgct acacttggtg gtgaagtggc       480
     cctctggtca ctggtagtat tggccgttga aagatatatg gtggtctgca agcccatggc       540
     caacttccga ttcggggaga accatgctat tatgggtgta gccttcacat ggatcatggc       600
     tttgtcttgt gctgctcctc ctctcttcgg atggtccaga tacatcccag agggaatgca       660
     atgctcatgc ggagtagact actacacact gaagcctgag gtcaacaatg aatcctttgt       720
     tatctacatg ttcattgtcc acttcaccat tcccctgatt gtcatcttct tctgctatgg       780
     tcgcctgctc tgcactgtca aagaggctgc agcccagcaa caggaatctg ctaccaccca       840
     gaaggctgag aaagaggtca ccagaatggt tgttatcatg gtcgttttct tcctgatctg       900
     ttgggtgccc tatgcctatg tggcattcta catcttcacc caccagggct ctaactttgg       960
     cccagtcttc atgaccgtcc cagctttctt tgccaagagc tctgctatct acaatcctgt      1020
     catctacatt gtcttgaaca aacagttccg taactgcttg atcaccaccc tgtgctgtgg      1080
     aaagaatcca ttcggtgatg aagatggctc ctctgcagcc acctccaaga cagaagcttc      1140
     ttctgtctct tccagccagg tgtctcctgc ataagagctt caccagggct gtctcagggt      1200
     ccgctgcctc acacaattcc catcacttaa gccctgtcta cttgttgcga aggcaaagaa      1260
     ttccacagtt ttaatattta cccccattct gcccaacctt ggacactgta agagctgacc      1320
     ccattactgc tgggaaggcc caagctttgt tgcattctga tgtgatcctt tcagcagaaa      1380
     atgggtggat tcaatgaatt tcaccaaggc tgtacataac aataacatta gtctgaaggc      1440
     acctcccacc cagagaatgc aacacttatt tatctctgtc ttttcttgac atattgatgc      1500
     tgcttctatt catggtcact aacaaaaagt cccattttac aatgcaactg aaagtaatgt      1560
     atttttgtaa tataataaca tatttcatgc aatctcctct gcttattggc aaggtctgat      1620
     atagtgagga tagacagcca gaccccttgc attaaaatcc tgtattaaaa atttctttgc      1680
     aagt                                                                   1684
//
ID   XL23808    standard; DNA; VRT; 4734 BP.
XX
AC   U23808;
XX
SV   U23808.1
XX
DT   23-APR-1995 (Rel. 43, Created)
DT   04-MAR-2000 (Rel. 63, Last updated, Version 7)
XX
DE   Xenopus laevis rhodopsin gene, complete cds.
XX
KW   .
XX
OS   Xenopus laevis (African clawed frog)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC   Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus.
XX
RN   [1]
RP   1-4734
RX   MEDLINE; 96216396.
RA   Batni S., Scalzetti L., Moody S.A., Knox B.E.;
RT   "Characterization of the Xenopus rhodopsin gene";
RL   J. Biol. Chem. 271(6):3179-3186(1996).
XX
RN   [2]
RP   1-4734
RA   Batni S., Scalzetti L., Knox B.E.;
RT   ;
RL   Submitted (30-MAR-1995) to the EMBL/GenBank/DDBJ databases.
RL   Barry E. Knox, Biochemistry and Molecular Biology, SUNY HSC at Syracuse,
RL   750 E. Adams St., Syracuse, NY 13210, USA
XX
DR   SWISS-PROT; P29403; OPSD_XENLA.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..4734
FT                   /db_xref="taxon:8355"
FT                   /organism="Xenopus laevis"
FT   mRNA            join(1181..1650,1899..2067,2669..2834,3085..3324,
FT                   4030..4687)
FT                   /product="rhodopsin"
FT   CDS             join(1290..1650,1899..2067,2669..2834,3085..3324,
FT                   4030..4158)
FT                   /codon_start=1
FT                   /db_xref="SWISS-PROT:P29403"
FT                   /note="cDNA sequence deposited under GenBank Accession
FT                   Number L07770"
FT                   /product="rhodopsin"
FT                   /protein_id="AAC59901.1"
FT                   /translation="MNGTEGPNFYVPMSNKTGVVRSPFDYPQYYLAEPWQYSALAAYMF
FT                   LLILLGLPINFMTLFVTIQHKKLRTPLNYILLNLVFANHFMVLCGFTVTMYTSMHGYFI
FT                   FGQTGCYIEGFFATLGGEVALWSLVVLAVERYMVVCKPMANFRFGENHAIMGVAFTWIM
FT                   ALSCAAPPLFGWSRYIPEGMQCSCGVDYYTLKPEVNNESFVIYMFIVHFTIPLIVIFFC
FT                   YGRLLCTVKEAAAQQQESATTQKAEKEVTRMVVIMVVFFLICWVPYAYVAFYIFTHQGS
FT                   NFGPVFMTVPAFFAKSSAIYNPVIYIVLNKQFRNCLITTLCCGKNPFGDEDGSSAATSK
FT                   TEASSVSSSQVSPA"
XX
SQ   Sequence 4734 BP; 1315 A; 1046 C; 985 G; 1388 T; 0 other;
     cgtaactagg accccaggtc gacacgacac cttccctttc ccagttattt cccctgtaga        60
     cgttagaagg ggaaggggtg tacttatgtc acgacgaact acgtccttga ctacttaggg       120
     ccagagagac gaggtaaaaa ctcatgtctc tgaacacttt agatctcttg acgttctgta       180
     ctaagtttca cgattcacgt tttttgttac caccaaatat agacagaaac atgaaatgaa       240
     caagtgaatg tcagggatgt taacacagat cacgtcacca ggggttggtc atcgagcaat       300
     cattgtacaa cgagggggtt ggggaaccta caacgagggt taccggagtt ttgttaacga       360
     ataaaaagtt aaggtccgtt caaaaccaac gtatttttgg tccagatacc ggtttgtctc       420
     gggggagacc cgacgtttag gtgtttcccg atggtttatc tgttagtata agaaataatc       480
     cgtggggttc ccgaaaaaag tgcgaacacg acgaggcgtt gagaaaaatg taaacttaca       540
     ccgaataccc aatttttcca cgttgtgttt gtttattaga taataaatgt gtgatcagtt       600
     ctgaccacga gtcgacacca aacttctaag attaagttac ttgattacca ttggtcccgg       660
     cctaaacata aactgcagcc cctaggccat gcggtcctaa cgtctgtcca cgacgagtct       720
     tattgccatc cacccgcaac tcccgcaagt gcaaattttg gagcactggt gctcttcagc       780
     aagtggctgg gcggcatgcc gtccctaaaa gttcgccgcc ctaggcacag gcctttgtgg       840
     cctctccaca aatccaagcc tgatggtaac taaatgtaga gggaactgag taaaccccaa       900
     aaatggctgc cctggctcct acaatatgga attatctcct gtaggtcaga cctggatttc       960
     ttcctgtcac ttttaaatac actttcttct tgtgtgttta acagagagag agattgacag      1020
     gtgtagactt aatacgttta agggaagcca attaacactt tgcaatttta gcttggatta      1080
     cagtgattaa tagtgcgcta aatcctttgt tcgtgacgct gggggttgca agcttactcc      1140
     aggtgggact ttaaaaggac gaggggacag tgggtcatac tgtagaacag cttcagttgg      1200
     gatcacaggc ttctagggat cctttgggca aaaaagaaac acagaaggca ttctttctat      1260
     acaagaaagg actttataga gctgctacca tgaacggaac agaaggtcca aatttttatg      1320
     tccccatgtc caacaaaact ggggtggtac gaagcccatt cgattaccct cagtattact      1380
     tagcagagcc atggcaatat tcagcactgg ctgcttacat gttcctgctc atcctgcttg      1440
     ggttaccaat caacttcatg accttgtttg ttaccatcca gcacaagaaa ctcagaacac      1500
     ccctaaacta catcctgctg aacctggtat ttgccaatca cttcatggtc ctgtgtgggt      1560
     tcacggtgac aatgtacacc tcaatgcacg gctacttcat ctttggccaa actggttgct      1620
     acattgaagg cttctttgct acacttggtg gtaagttcca atgggctttc gtcactgata      1680
     ttgttgtagc aataaattct tggaaagctc gtaagggaac aagctaccag ggaaagggtt      1740
     atagggctga aaaggaatat cagtactttc tatgttctcc agcagagtgt agtgcatacc      1800
     atgttagaga aagttcaaca tgtaatactg tgaggggcca aattgcctgg gttgagtcat      1860
     gttaaccttt tgccttttcc tgttcttttt actaacaggt gaagtggccc tctggtcact      1920
     ggtagtattg gccgttgaaa gatatatggt ggtctgcaag cccatggcca acttccgatt      1980
     cggggagaac catgctatta tgggtgtagc cttcacatgg atcatggctt tgtcttgtgc      2040
     tgctcctcct ctcttcggat ggtccaggta aatatatata acatcagtca gcatatccct      2100
     agaaaagtat atctaatgat acaactacgg tatatataaa cttgtagaaa catccaccaa      2160
     agttacagca tgagttaagg aagagtacat agaaggtcag ctaatgcttt ggaaaaatac      2220
     aatagaaggt cagctaatgc agaggttacc aaactccttt gggggctcca agctttggat      2280
     ggaagcccag tttgaggtca aggtttgaga tttgttaatt actcctggaa ctagaaaaga      2340
     gttagttgcc cacatcttat aacagcgaga caatactgac aattggtagt tgttgctgaa      2400
     attcagcttt ctacacccca ctacagccat tggctgcaat attgagttca gcttggagag      2460
     aactcaatcc aggattgcac ttctacattt tattccagta ttctatttat cagatgagct      2520
     tgtgcttaaa ccccaaggac tcaatgctga tgaataatgt taggatttac agttcaataa      2580
     caattgagag atacaggatg tctattcctg taatgtgggt aacagagtat gtgcttgttg      2640
     gctctgacac tatattgtcc ttgtgcagat acatcccaga gggaatgcaa tgctcatgcg      2700
     gagtagacta ctacacactg aagcctgagg tcaacaatga atcctttgtt atctacatgt      2760
     tcattgtcca cttcaccatt cccctgattg tcatcttctt ctgctatggt cgcctgctct      2820
     gcactgtcaa agaggtgagt agtcattatc atttggtcat ggtcacaacc caatccaact      2880
     agttctaaac atagaccctc caggtgttat tgaactgtta ctacttcttg gacttctcta      2940
     caaccttgtt tgactgactg gagagagaaa gatcagtaaa atctgattat gaagagaaca      3000
     aagtcctaca ccttgtatgc ccaatatcta ctactagact gttgctcttc tgtcctaact      3060
     tctcttatct tacccatttc ataggctgca gcccagcaac aggaatctgc taccacccag      3120
     aaggctgaga aagaggtcac cagaatggtt gttatcatgg tcgttttctt cctgatctgt      3180
     tgggtgccct atgcctatgt ggcattctac atcttcaccc accagggctc taactttggc      3240
     ccagtcttca tgaccgtccc agctttcttt gccaagagct ctgctatcta caatcctgtc      3300
     atctacattg tcttgaacaa acaggtacta aactacttcc aagtctgttc ttatttttta      3360
     atcagcagtt tgtcaacttt atgtatattt cctctcctat atgggtttcc aagggtttct      3420
     atgtaatata taggatacca agaattctga ccaccagctc ttgttgagac tcccaccagt      3480
     ctacagctgt catctaggaa tggtggaagt ttcagttcaa ccaaagcaaa gagtgctaaa      3540
     catgagctga ttaactatga ctcccattgt ctatagctgc agttaaaaaa agtcatggag      3600
     aatgttctgc tacttatgat gactgtgttg ccttaggatc agcatacaac ttggggtagt      3660
     aagggcattt gtcttaggtc ccaaaatgga aggggctttt agaggagaaa cacagataaa      3720
     actacaaaga ccaccagtgt tttagtattt taaaacacgg gtaataaccc ttgagcaaac      3780
     ttcgtgtgct ggattaatta ttacgtacct ttcgttgggg gtgccgtcct cctatgatcc      3840
     atgcaccgtg aacgttgaaa gagggaccag gtgtgcatct gcatttcgtt tggcttagta      3900
     ttttacaacc ttcgtataca tcaatatgca atgcattact tatttttagg gtagtagaga      3960
     ctaaatgagt acaacaatac agaagagatg aatggactag ataatgactg ttctcctttc      4020
     tctccccagt tccgtaactg cttgatcacc accctgtgct gtggaaagaa tccattcggt      4080
     gatgaagatg gctcctctgc agccacctcc aagacagaag cttcttctgt ctcttccagc      4140
     caggtgtctc ctgcataaga gcttcaccag ggctgtctca gggtccgctg cctcacacaa      4200
     ttcccatcac ttaagccctg tctacttgtt gcgaaggcaa agaattccac agttttaata      4260
     tttaccccca ttctgcccaa ccttggacac tgtaagagct gaccccatta ctgctgggaa      4320
     ggcccaagct ttgttgcatt ctgatgtgat cctttcagca gaaaatgggt ggattcaatg      4380
     aatttcacca aggctgtaca taacaataac attagtctga aggcacctcc cacccagaga      4440
     atgcaacact tatttatctc tgtcttttct tgacatattg atgctgcttc tattcatggt      4500
     cactaacaaa aagtcccatt ttacaatgca actgaaagta atgtattttt gtaatataat      4560
     aacatatttc atgcaatctc ctctgcttat tggcaaggtc tgatatagtg aggatagaca      4620
     gccagacccc ttgcattaaa atcctgtatt aaaaatttct ttgcaagtaa aaaaaaaaac      4680
     acaaaaagtc aaatgtctta ttcgatttat ttcacacttt gattgtctgg ttat            4734
//
